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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank146Aligned Residues238
% Identity22%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80..... ....90.........100.........110.....
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Query Sequence  YVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE. . . . . EDAQDVKKIIEECGRKAVLLPGDLSDEKFA
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Template Sequence  LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQI
Template Known Secondary structure 



STTTT
T
SSTTT
S
SS

SSS


T


TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   116...120.........130.........140.........150.........160.........170... ......180.........190..
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Query Sequence  RSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP. . LLPKGASIITTSSIQAYQP.
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Template Sequence  SAAVEKAIKKFGGIDILVNNASAISLTN. TLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV
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   82.......90.........100......... 110.........120.........130.........140.........150.........160
 
   193......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  . SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVY
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Template Sequence  WFKQHCAYTIAKYGMSMYVLGMAEEFKG. EIAVNALWPKTAIHTAA. . . . . . . . . MDMLGGPGIESQCRKVDIIADAA. Y
Template Known Secondary structure  SSTTT.T

SB
B

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TTGGGG
B
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   161........170.........180........ .190.........200..... ....210.........220........ .
 
   272.......280.........290.
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Query Sequence  LASQESSYVTAEVHGVCGGE
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Template Sequence  SIFQKPKSFTGNFV. IDENI
Template Known Secondary structure  TS
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   230.........240... .....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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