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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank62Aligned Residues237
% Identity29%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT. . EAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE
Template Known Secondary structure  TTTT
S
SSTT
SS..T




TT
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   4.....10.........20.........30.........40 .........50.........60.........70.........80.
 
   126...130.........140.........150.........160.........170....... ..180.........190.........200....
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK. GASIITTSSIQAYQPSPHLLDYAATKA
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Template Sequence  FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKA
Template Known Secondary structure  S











GGG

TT



T

TT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   205....210.........220.........230.........240.........250.........260.........270.........280....
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Query Sequence  AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV
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Template Sequence  GVAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTT
Template Known Secondary structure  GGGT

SB




.........T
TT
S
B
SGGGTT

S
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   162.......170.........180.........190..... ....200.........210.........220.........230..
 
   285....290...
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Query Sequence  HGVCGGEHL
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Template Sequence  LHVNGGMFM
Template Known Secondary structure  STTSS
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   240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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