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Job DescriptionP0AG84
Confidence98.93%DateWed Jan 25 15:20:34 GMT 2012
Rank227Aligned Residues245
% Identity16%Templatec3enkB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: 1.9a crystal structure of udp-glucose 4-epimerase from2 burkholderia pseudomallei
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90.........100.........110.........120.......
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Query Sequence  KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG
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Template Sequence  TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKR. EAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA
Template Known Secondary structure  SS
TTTSTT



SSS
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TT
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   3......10.........20.........30.........40.. .......50.........60.........70.........80.
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL
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Template Sequence  IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQ
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TT

GGGB
S
SSSSB
TTS

B
SS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   208.210.........220... ......230.........240.........250........ .260....
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Query Sequence  NYSRGLAKQVAEKGIR. . . VNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKR. . . . . . . . . . . . . . . . . . . . AGQPAE
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Template Conservation                   
     
                                                   
 
 
Template Sequence  ILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD
Template Known Secondary structure 
TT




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S
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   265....270.........280.........290...
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Query Sequence  LAPVYVYLASQESSYVTAEVHGVCGGEHL
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Template Sequence  LARGHIAALDALERRDASLTVNLGTGRGY
Template Known Secondary structure  TTS
S
S

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   242.......250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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