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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank127Aligned Residues239
% Identity18%Templatec3e03C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a putative dehydrogenase from2 xanthomonas campestris
Resolution1.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80..... ....90.........100.........110.........120
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE. . . . . EDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVH
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Template Sequence  TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA
Template Known Secondary structure 

TT
TTTSTT
S

S

SSS


TS

TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   121........130.........140.........150.........160........ .170.........180.........190.. .....
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Query Sequence  EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLT. QEAIPLLPKGASIITTSSIQAYQP. . SPHLL
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Template Sequence  ATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT
Template Known Secondary structure  S











GGGS
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   198.200.........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQES
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Template Sequence  GYTLAKXGXSLVTLGLAAEFGPQGVAINALWPRTVIATDAINXLP. . . . . . . . . . GVDAAACRRPEIXADAAHAVLTREA
Template Known Secondary structure  GGGT

SB
B
SGGGGGST..........T

GGGSB
TTS

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   164.....170.........180.........190.........200........ .210.........220.........230...
 
   278.280.........290....
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Query Sequence  SYVTAEVHGVCGGEHLG
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Template Sequence  AGFHGQFLIDDEVLAQA
Template Known Secondary structure  TT

S
T
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   234.....240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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