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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank27Aligned Residues241
% Identity27%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDIN. . QELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESE
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TT
T
SSTT
SS..TT




TT
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   11........20.........30.........40....... ..50.........60.........70.........80........
 
   126...130.........140.........150.........160.........170.. .......180.........190.........200....
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAI. PLLPKGASIITTSSIQAYQPSPHLLDYAATKA
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Template Sequence  VGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG
Template Known Secondary structure  T












GGGS
TT


GGGT


TT
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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   205....210.........220.........230.........240.........250.........260.........270.........280....
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Query Sequence  AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV
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Template Sequence  GLKMLTKNIASEYGEANIQCNGIGPGYIATPQ. . . . . . THPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHI
Template Known Secondary structure  GGGT
SB

TT......


TT
S
B
SGGGTT

S
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   169170.........180.........190.........200 .........210.........220.........230.........240..
 
   285....290.. ..
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Query Sequence  HGVCGGEH. . LG
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Template Sequence  LYVDGGILAYIG
Template Known Secondary structure  STTGGG


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   255....260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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