Job Description P0AG84 Confidence 99.55% Date Wed Jan 25 15:20:34 GMT 2012 Rank 207 Aligned Residues 246 % Identity 14% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.																									.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																									.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		Q	P	T	P	G	I	Q	A	K	M	T	P	V	P	D	C	G	E	K	T	Y	V	G	.	.	.	.	.	.	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	K	D	R	K	A	L	V	T	G	.	G	D	S	G	I	G	R	A	A	A	I	A	Y
Query Conservation																									.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																									.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		P	N	K	S	T	I	S	K	T	V	S	S	T	I	P	R	E	T	I	P	F	L	H	L	R	K	K	T	P	A	G	D	W	K	Y	D	R	Q	L	S	S	L	F	L	D	G	L	E	K	A	A	F	N	G	V	T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L
Template Known Secondary structure		T	S					S	S		G	G	G	G	S		T	T				S	S							T	T	S																						T		B			T	T							S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.													.	.	130	.	.	.	.
Predicted Secondary structure																						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	E	G	A	D	V	A	I	S	Y	L	P	V	E	E	E	D	A	Q	.	.	.	D	V	K	K	I	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	K	F	A	R	S	L	V	H	E	A	H	K	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	I	M	A	L
Query Conservation																						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F	I	Y	D	T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E
Template Known Secondary structure				T	T								S	S																			T	T										T	T														S		T	T	T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	K	Q	V	A	I	P	D	I	A	D	L	T	S	E	Q	F	Q	K	T	F	A	I	N	V	F	A	L	F	W	L	T	Q	E	A	I	P	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	L	L	D	Y	A	A	T	K	A	A	I	L	N	Y	S	R	G	L	A
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G	T	F	G	.	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H
Template Known Secondary structure			S	B		G	G	G													T																T	T	T			S											S		T	T		S	S	.	.		B	T	T								G	G	G
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y	V	Y	L	A	S	Q	E	S
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																	.
Template Conservation																							.	.	.	.	.	.	.	.																	.
Template Sequence		S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	.	.	.	.	.	.	.	.	N	N	I	I	A	E	G	I	E	K	M	G	V	R	T	F	.	S	Q	K	E	M	A	F	N	L	L	G	L	L	T	P	E	V
Template Known Secondary structure			S	S		T	T	T															.	.	.	.	.	.	.	.			T	T						T	T	T		B			.											G	G	G	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																	.
Template SS confidence
		855	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.									.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.		.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions