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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank71Aligned Residues240
% Identity26%Templatec2pd6D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:estradiol 17-beta-dehydrogenase 8; PDBTitle: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD. . RAAAQETVRLLNHAAFQA. . DVSEARAARCLLEQVQACFSR
Template Known Secondary structure  TTTT
TTTSTT
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   8.10.........20.........30.........40.... .....50.........60.. .......70.........80...
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA
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Template Sequence  PPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAG
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GGG

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TT
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH
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Template Sequence  VIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK. . VPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSV
Template Known Secondary structure  GGGT
SB
STTTTT..S
T
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S
B
SGGGTT

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   176...180.........190.........200......... 210.........220.........230.........240.........250...
 
   286...290.
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Query Sequence  GVCGGE
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Template Sequence  EVTGGL
Template Known Secondary structure  STT
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   254.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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