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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank70Aligned Residues243
% Identity27%Templatec2p68A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of aq_1716 from aquifex aeolicus vf5
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG. ERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL
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TT
SS
SSTT
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TT
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   4.....10.........20.........30.........40. ........50.........60.........70.........80..
 
   126...130.........140.........150.........160.........170 .........180.........190.........200....
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQE. AIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA
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Template Sequence  VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKA
Template Known Secondary structure  SS

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GGG

T
T


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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   205....210.........220.........230.........240.........250.........260.........270.........280....
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Query Sequence  AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV
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Template Sequence  GLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS. . EEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEV
Template Known Secondary structure  GGGT
SB

GGGGGS
..TT
TTSS
B
SGGGTT

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   163......170.........180.........190......... 200.........210.........220.........230.........240
 
   285....290.
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Query Sequence  HGVCGGE
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Template Sequence  IHVNGGM
Template Known Secondary structure  STT
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   241......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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