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Job DescriptionP0AG84
Confidence99.97%DateWed Jan 25 15:20:34 GMT 2012
Rank167Aligned Residues215
% Identity22%Templatec2nwqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable short-chain dehydrogenase; PDBTitle: short chain dehydrogenase from pseudomonas aeruginosa
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
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Query Sequence  RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL
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Template Sequence  STLFITGATSGFGEACARRFAEAGWSLVLTGRR. . EERLQALAGELS. AKTRVLPLTLDVRDRAAXSAAVDNLPEEFATL
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SSTTTSSTT
S
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TT
T

GGGSS
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   3......10.........20.........30..... ....40....... ..50.........60.........70.........
 
   130.........140.........150.........160.........170..... ....180.........190.........200......
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Query Sequence  DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLL. . . PKGASIITTSSIQAYQPSPHLLDYAATKAAI
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Template Sequence  RGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFV
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GGG

T
TT


GGGTS

TT
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHG
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Template Sequence  EQFSLNLRCDLQGTGVRVTNLEPGLCEGA. . . . . . . . . . . . . . . . . . . . . . HPIQPEDIAETIFWIXNQPA. HLNINSLE
Template Known Secondary structure  TT
TTS


SB


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B
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   160.........170.........180........ .190.........200........ .210......
 
   287..290
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Query Sequence  VCGG
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Template Sequence  IXPV
Template Known Secondary structure 

T
Template Predicted Secondary structure 

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   237..240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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