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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank135Aligned Residues237
% Identity27%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
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Query Sequence  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL
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Template Sequence  LQGKVALITGASSGIGEATARALAAEGAAVAIAARR. . VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL
Template Known Secondary structure  TTT
STTSTT
S
..TT



TT
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   5....10.........20.........30.........40 .........50.........60.........70.........80..
 
   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAI
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Template Sequence  GGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGV
Template Known Secondary structure  S

S








STT

TT


GGGT


TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHG
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Template Sequence  NAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH. TATKEXYEQRISQIRKLQAQDIAEAVRYAVT. APHHATVHEIF
Template Known Secondary structure  GGGT

SB
SSGGGG


.TSSS

B
.S
TT



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   163......170.........180.........190........ .200.........210.........220......... 230.........240
 
   287
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Query Sequence  V
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Template Sequence  I
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   241
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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