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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank133Aligned Residues220
% Identity30%Templatec2hq1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: crystal structure of orf 1438 a putative glucose/ribitol2 dehydrogenase from clostridium thermocellum
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
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Query Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA
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Template Sequence  QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPA. STSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA
Template Known Secondary structure  TTTT
SS
SSTT

TT.
STT

S
TTS
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   2.......10.........20.........30......... 40.........50.........60.........70.........80
 
   126...130.........140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA
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Template Sequence  FGRIDILVNNA. . . . . . . . . . . . . . . . . . . . . . . WDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSQANYAASKAG
Template Known Secondary structure  S




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   81........90. ........100.........110.........120.........130.......
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  ILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH
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Template Sequence  LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV. . LPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVI
Template Known Secondary structure  GGGT
SB

T..S
TTSTTSS
B
SGGGTT

S
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   162.......170.........180.........190..... ....200.........210.........220.........230.........
 
   286...290.
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Query Sequence  GVCGGE
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Template Sequence  NIDGGL
Template Known Secondary structure  STT
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   240.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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