Job Description P0AG84 Confidence 100.00% Date Wed Jan 25 15:20:34 GMT 2012 Rank 131 Aligned Residues 234 % Identity 27% Template c2ekqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-deoxy-d-gluconate 3-dehydrogenase; PDBTitle: structure of tt0495 protein from thermus thermophilus Resolution 1.80 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	K	A	L	V	T	G	G	D	S	G	I	G	R	A	A	A	I	A	Y	A	R	E	G	A	D	V	A	I	S	Y	L	P	V	E	E	E	D	A	Q	D	V	K	K	I	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	K	F	A	R	S	L	V	H	E	A	H	K	A	L	G	G
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	K	A	L	V	T	G	G	S	R	G	I	G	R	A	I	A	E	A	L	V	A	R	G	Y	R	V	A	I	A	S	R	N	P	E	E	A	A	Q	S	L	.	.	.	.	.	.	.	.	.	.	G	A	V	P	L	P	T	D	L	E	K	D	D	P	K	G	L	V	K	R	A	L	E	A	L	G	G	L
Template Known Secondary structure									T	T	T	S													T	T								S	S									.	.	.	.	.	.	.	.	.	.	T								T	T	T	S														T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		L	D	I	M	A	L	V	A	G	K	Q	V	A	I	P	D	I	A	D	L	T	S	E	Q	F	Q	K	T	F	A	I	N	V	F	A	L	F	W	L	T	Q	E	A	I	P	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	.	.	L	L	D	Y	A	A	T	K	A	A	I
Query Conservation																																																																					.	.
Alig confidence																																																																					.	.
Template Conservation
Template Sequence		H	V	L	V	H	A	A	A	V	N	V	R	K	P	A	L	E	L	S	Y	E	E	W	R	R	V	L	Y	L	H	L	D	V	A	F	L	L	A	Q	A	A	A	P	H	M	A	E	A	G	W	G	R	V	L	F	I	G	S	V	T	T	F	T	A	G	G	P	V	P	I	P	A	Y	T	T	A	K	T	A	L
Template Known Secondary structure																T	T	T														T																		T										G	G	G	T	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Y	S	R	G	L	A	K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y	V	Y	L	A	S	Q	E	S	S	Y	V	T	A	E	V	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	T	R	A	L	A	K	E	W	A	R	L	G	I	R	V	N	L	L	C	P	G	Y	V	E	T	E	F	T	L	P	L	R	Q	N	P	E	L	Y	E	P	I	T	A	R	I	P	M	G	R	W	A	R	P	E	E	I	A	R	V	A	A	V	L	C	G	D	E	A	E	Y	L	T	G	Q	A	V	A
Template Known Secondary structure													G	G	G	T										S	B		S	G	G	G					T										T	T		T	T	S	S		B													T	S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		287	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	G	G	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	G	G	F	L
Template Known Secondary structure			S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions