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Job DescriptionP0AG84
Confidence100.00%DateWed Jan 25 15:20:34 GMT 2012
Rank100Aligned Residues237
% Identity25%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  GSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA
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Template Sequence  GFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH. . . . . . . . . . . . . DPGEAKYDHIECDVTNPDQVKASIDHI
Template Known Secondary structure 

GGGTT
T
SSTT
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S
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TT
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   1........10.........20.........30.........40 .........50.........60.......
 
   123......130.........140.........150.........160.........170....... ..180.........190.........200.
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Query Sequence  HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK. GASIITTSSIQAYQPSPHLLDYAA
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Template Sequence  FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVT
Template Known Secondary structure  S









B
TTTS
TTTSSS


GGGTS

TTB
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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   202.......210.........220.........230.........240. ........250.........260.........270..
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Query Sequence  TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG. . . . . . . . . QTQDKIPQFGQQTPMKRAGQPAELAPVYVYL
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Template Sequence  SKHAVIGLTKSIALDYAPL. LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFL
Template Known Secondary structure  TTT.S
SBSS
S
STTSS
B
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   148.150.........160...... ...170.........180.........190.........200.........210.........220......
 
   273......280.........290...
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Query Sequence  ASQESSYVTAEVHGVCGGEHL
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Template Sequence  ASREASFITGTCLYVDGGLSI
Template Known Secondary structure  SGGGTT

S
STTGGG
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   227..230.........240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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