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Job DescriptionP0AG84
Confidence98.37%DateWed Jan 25 15:20:34 GMT 2012
Rank264Aligned Residues229
% Identity13%Templatec2b69A_
PDB info PDB header:lyaseChain: A: PDB Molecule:udp-glucuronate decarboxylase 1; PDBTitle: crystal structure of human udp-glucoronic acid decarboxylase
Resolution1.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
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Query Sequence  RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL
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Template Sequence  KRILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGR. . . . . . . . KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLA
Template Known Secondary structure 
TTTSTT


SS

........GGGTGGGTT
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   5....10.........20.........30.........40. ........50.........60.........70......
 
   130...... ...140.........150.........160.........170.........180.........190.........200........
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Query Sequence  DIMALVA. GKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILN
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Template Sequence  SPASPPNYXYNPIKTLKTNTIGTLNXLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET
Template Known Secondary structure  S

STT
T
GGGGBS
SSSSB
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   77..80.........90.........100.........110.........120.........130.........140.........150......
 
   209210.........220.........230.........240... ......250....... ..260.........270.......
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Query Sequence  YSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT. . QDKIPQFGQQTPMK. . . . . . . . . RAGQPAELAPVYVYLASQES
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Template Sequence  XCYAYXKQEG. . . VEVRVARIFNTFGPRXHXNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALX. . . .
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   157..160...... ...170.........180.........190.........200.........210.........220.........
 
   278.280.........290...
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Query Sequence  SYVTAEVHGVCGGEHL
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Template Conservation                  
Template Sequence  NSNVSSPVNLGNPEEH
Template Known Secondary structure  TSS

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   230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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