Job Description P0AG84 Confidence 96.13% Date Wed Jan 25 15:20:34 GMT 2012 Rank 353 Aligned Residues 210 % Identity 13% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		R	K	A	L	V	T	G	G	D	S	G	I	G	R	A	A	A	I	A	Y	A	R	E	G	A	D	V	A	I	S	Y	L	P	V	E	.	.	E	E	D	A	Q	D	V	K	K	I	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	K	F	A	R	S	L	V	H	E	A	H	K	A	L	G
Query Conservation																																					.	.
Alig confidence										.																											.	.
Template Conservation										.
Template Sequence		S	S	V	G	V	L	G	L	.	G	T	M	G	R	G	I	A	I	S	F	A	R	V	G	I	S	V	V	A	V	E	S	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	E	L	S	T	V	D
Template Known Secondary structure										.	S												T	T	T								S	S																									T	T												S		G	G	G	G	T	T		S
Template Predicted Secondary structure										.
Template SS confidence
		297	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	I	M	A	L	V	A	G	K	Q	V	A	I	P	D	I	A	D	L	T	S	E	Q	F	Q	K	T	F	A	I	N	V	F	A	L	F	W	L	T	Q	E	A	I	P	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	L	L	D	Y	A	A	T	K	A	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	V	E	A	V	F	E	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T	H	F	F	S	P	A	H	V	M	R	L	L	E	V	I	P	S	R	Y	S	S	P	T	T	I
Template Known Secondary structure									S																S		T	T								S	S	S							T	T	S	S		G	G	G								S	S	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	S	R	G	L	A	K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y
Query Conservation
Alig confidence																			.															.	.	.	.	.	.													.	.
Template Conservation																			.															.	.	.	.	.	.													.	.
Template Sequence		A	T	V	M	S	L	S	K	K	I	G	K	I	G	V	V	V	.	G	N	C	Y	G	F	V	G	N	R	M	L	A	P	.	.	.	.	.	.	Y	Y	N	Q	G	F	F	L	L	E	E	G	.	.	S	K	P	E	D	V	D	G	V	L
Template Known Secondary structure											T	T						B	.			S	T	T	T	T								.	.	.	.	.	.											T	T	.	.
Template Predicted Secondary structure																			.															.	.	.	.	.	.													.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.							.	.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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