Email l.a.kelley@imperial.ac.uk Description P0AE85 Date Thu Jan 5 11:22:46 GMT 2012 Unique Job ID 5c85a20df6173c80

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3itfA_ 99.9 93 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic adaptor protein cpxp; PDBTitle: structural basis for the inhibitory function of the cpxp adaptor2 protein 2 c3qzcA_ 99.9 100 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic protein cpxp; PDBTitle: structure of the periplasmic stress response protein cpxp 3 c3o39A_ 99.8 26 PDB header:chaperone Chain: A: PDB Molecule:periplasmic protein related to spheroblast formation; PDBTitle: crystal structure of spy 4 c3epvB_ 99.7 8 PDB header:metal binding protein Chain: B: PDB Molecule:nickel and cobalt resistance protein cnrr; PDBTitle: x-ray structure of the metal-sensor cnrx in both the apo- and copper-2 bound forms 5 c3oeoD_ 99.7 30 PDB header:signaling protein Chain: D: PDB Molecule:spheroplast protein y; PDBTitle: the crystal structure e. coli spy 6 c3layF_ 98.6 17 PDB header:metal binding protein Chain: F: PDB Molecule:zinc resistance-associated protein; PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2 7 c2qguA_ 82.1 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable signal peptide protein; PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89 8 d3cmna1 61.1 20 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Caur0242-like 9 c3cmnA_ 57.2 19 PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of a putative hydrolase with a novel fold2 from chloroflexus aurantiacus 10 c2i9lL_ 54.3 28 PDB header:immune system/viral protein Chain: L: PDB Molecule:virion membrane protein m25; PDBTitle: structure of fab 7d11 from a neutralizing antibody against the2 poxvirus l1 protein 11 d1ek8a_ 44.5 21 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 12 d1dd5a_ 41.2 16 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 13 c3g6iA_ 39.9 13 PDB header:unknown function Chain: A: PDB Molecule:putative outer membrane protein, part of carbohydrate PDBTitle: crystal structure of an outer membrane protein, part of a putative2 carbohydrate binding complex (bt_1022) from bacteroides3 thetaiotaomicron vpi-5482 at 1.93 a resolution 14 c2crjA_ 37.7 13 PDB header:gene regulation Chain: A: PDB Molecule:swi/snf-related matrix-associated actin- PDBTitle: solution structure of the hmg domain of mouse hmg domain2 protein hmgx2 15 c2ctoA_ 37.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the hmg box like domain from human2 hypothetical protein flj14904 16 c2an7A_ 36.8 36 PDB header:dna binding protein Chain: A: PDB Molecule:protein pard; PDBTitle: solution structure of the bacterial antidote pard 17 d1q44a_ 34.5 10 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 18 d1olma1 34.4 15 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 19 c2k5jB_ 33.4 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yiif; PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1 20 d1pcfa_ 32.6 30 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Transcriptional coactivator PC4 C-terminal domain 21 c1o6uA_ not modelled 31.7 15 PDB header:transferase Chain: A: PDB Molecule:sec14-like protein 2; PDBTitle: the crystal structure of human supernatant protein factor 22 c3ieeA_ not modelled 30.8 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of hypothetical protein bf3319 from bacteroides2 fragilis (yp_212931.1) from bacteroides fragilis nctc 9343 at 1.70 a3 resolution 23 c2eqzA_ not modelled 30.6 8 PDB header:transcription Chain: A: PDB Molecule:high mobility group protein b3; PDBTitle: solution structure of the first hmg-box domain from high2 mobility group protein b3 24 c2co9A_ not modelled 29.6 21 PDB header:transcription Chain: A: PDB Molecule:thymus high mobility group box protein tox; PDBTitle: solution structure of the hmg_box domain of thymus high2 mobility group box protein tox from mouse 25 c1y698_ not modelled 27.8 19 PDB header:ribosome Chain: 8: PDB Molecule:ribosome recycling factor; PDBTitle: rrf domain i in complex with the 50s ribosomal subunit from2 deinococcus radiodurans 26 c3b7qA_ not modelled 27.7 17 PDB header:signaling protein Chain: A: PDB Molecule:uncharacterized protein ykl091c; PDBTitle: crystal structure of yeast sec14 homolog sfh1 in complex with2 phosphatidylcholine 27 c1zd1B_ not modelled 27.7 16 PDB header:transferase Chain: B: PDB Molecule:sulfotransferase 4a1; PDBTitle: human sulfortransferase sult4a1 28 c2e6oA_ not modelled 26.6 5 PDB header:transcription, cell cycle Chain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: solution structure of the hmg box domain from human hmg-box2 transcription factor 1 29 c3fghA_ not modelled 26.4 9 PDB header:transcription Chain: A: PDB Molecule:transcription factor a, mitochondrial; PDBTitle: human mitochondrial transcription factor a box b 30 c3lf9A_ not modelled 26.0 15 PDB header:immune system Chain: A: PDB Molecule:4e10_d0_1is1a_001_c (t161); PDBTitle: crystal structure of hiv epitope-scaffold 4e10_d0_1is1a_001_c 31 c1wr1B_ not modelled 25.5 26 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 32 d1hsma_ not modelled 25.0 14 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 33 c2h8kA_ not modelled 24.8 21 PDB header:transferase Chain: A: PDB Molecule:sult1c3 splice variant d; PDBTitle: human sulfotranferase sult1c3 in complex with pap 34 d1akha_ not modelled 24.4 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 35 d1wqga1 not modelled 24.4 21 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 36 d1k99a_ not modelled 24.0 11 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 37 d1i11a_ not modelled 22.6 10 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 38 d1v63a_ not modelled 22.4 9 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 39 d1q20a_ not modelled 21.9 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 40 d1g3ma_ not modelled 21.9 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 41 d1eh1a_ not modelled 21.6 13 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 42 c2x5qA_ not modelled 21.6 27 PDB header:unknown function Chain: A: PDB Molecule:sso1986; PDBTitle: crystal structure of hypothetical protein sso1986 from2 sulfolobus solfataricus p2 43 c2gwhA_ not modelled 21.3 23 PDB header:transferase Chain: A: PDB Molecule:sulfotransferase 1c2; PDBTitle: human sulfotranferase sult1c2 in complex with pap and2 pentachlorophenol 44 c1hryA_ not modelled 20.9 16 PDB header:dna binding protein/dna Chain: A: PDB Molecule:human sry; PDBTitle: the 3d structure of the human sry-dna complex solved by2 multid-dimensional heteronuclear-edited and-filtered nmr 45 c1hrzA_ not modelled 20.9 16 PDB header:dna binding protein/dna Chain: A: PDB Molecule:human sry; PDBTitle: the 3d structure of the human sry-dna complex solved by2 multi-dimensional heteronuclear-edited and-filtered nmr 46 d1i94m_ not modelled 20.2 15 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Ribosomal protein S13 47 d2gzka2 not modelled 20.1 15 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 48 c2amiA_ not modelled 19.3 15 PDB header:cell cycle Chain: A: PDB Molecule:caltractin; PDBTitle: solution structure of the calcium-loaded n-terminal sensor2 domain of centrin 49 c3rh3A_ not modelled 18.9 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized duf3829-like protein; PDBTitle: crystal structure of an uncharacterized duf3829-like protein (bt_1908)2 from bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution 50 d1ckta_ not modelled 18.8 5 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 51 d1v65a_ not modelled 18.4 19 Fold:KRAB domain (Kruppel-associated box) Superfamily:KRAB domain (Kruppel-associated box) Family:KRAB domain (Kruppel-associated box) 52 c1hmfA_ not modelled 17.7 11 PDB header:dna-binding Chain: A: PDB Molecule:high mobility group protein fragment-b; PDBTitle: structure of the hmg box motif in the b-domain of hmg1 53 d1hmfa_ not modelled 17.7 11 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 54 c1wz6A_ not modelled 17.5 9 PDB header:transcription Chain: A: PDB Molecule:hmg-box transcription factor bbx; PDBTitle: solution structure of the hmg_box domain of murine bobby2 sox homolog 55 d1is1a_ not modelled 17.4 16 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 56 d1lwma_ not modelled 17.2 18 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 57 d1jebb_ not modelled 17.2 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 58 c2zvpX_ not modelled 16.8 20 PDB header:transferase Chain: X: PDB Molecule:tyrosine-ester sulfotransferase; PDBTitle: crystal structure of mouse cytosolic sulfotransferase msult1d1 complex2 with pap and p-nitrophenol 59 d3d1kb1 not modelled 16.7 21 Fold:Globin-like Superfamily:Globin-like Family:Globins 60 c1j3xA_ not modelled 16.6 6 PDB header:dna binding protein Chain: A: PDB Molecule:high mobility group protein 2; PDBTitle: solution structure of the n-terminal domain of the hmgb2 61 d1j3xa_ not modelled 16.6 6 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 62 d2uubm1 not modelled 16.4 15 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Ribosomal protein S13 63 d1j99a_ not modelled 16.1 21 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 64 c3u2bC_ not modelled 16.1 10 PDB header:transcription/dna Chain: C: PDB Molecule:transcription factor sox-4; PDBTitle: structure of the sox4 hmg domain bound to dna 65 d1auaa1 not modelled 15.8 14 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 66 d1gt0d_ not modelled 15.8 10 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 67 c2j8pA_ not modelled 15.7 28 PDB header:nuclear protein Chain: A: PDB Molecule:cleavage stimulation factor 64 kda subunit; PDBTitle: nmr structure of c-terminal domain of human cstf-64 68 d1j3da_ not modelled 15.6 14 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 69 d1ls6a_ not modelled 15.3 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 70 c3u3oA_ not modelled 15.3 16 PDB header:transferase Chain: A: PDB Molecule:sulfotransferase 1a1; PDBTitle: crystal structure of human sult1a1 bound to pap and two 3-cyano-7-2 hydroxycoumarin 71 c2da4A_ not modelled 15.3 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156; PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156 72 c2yulA_ not modelled 14.5 15 PDB header:transcription Chain: A: PDB Molecule:transcription factor sox-17; PDBTitle: solution structure of the hmg box of human transcription2 factor sox-17 73 d1hmja_ not modelled 14.1 6 Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5 74 c2d7lA_ not modelled 14.0 25 PDB header:gene regulation, dna binding protein Chain: A: PDB Molecule:wd repeat and hmg-box dna binding protein 1; PDBTitle: solution structure of the hmg box domain from human wd2 repeat and hmg-box dna binding protein 1 75 d3bfxa1 not modelled 13.8 24 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 76 c2kgrA_ not modelled 13.7 0 PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: solution structure of protein itsn1 from homo sapiens.2 northeast structural genomics consortium target hr5524a 77 d1aaba_ not modelled 13.7 3 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 78 c1aabA_ not modelled 13.7 3 PDB header:dna-binding Chain: A: PDB Molecule:high mobility group protein; PDBTitle: nmr structure of rat hmg1 hmga fragment 79 c2kz5A_ not modelled 13.6 21 PDB header:transcription Chain: A: PDB Molecule:transcription factor nf-e2 45 kda subunit; PDBTitle: solution nmr structure of transcription factor nf-e2 subunit's dna2 binding domain from homo sapiens, northeast structural genomics3 consortium target hr4653b 80 c1q1qA_ not modelled 13.6 14 PDB header:transferase Chain: A: PDB Molecule:sulfotransferase family, cytosolic, 2b, member 1 PDBTitle: crystal structure of human pregnenolone sulfotransferase2 (sult2b1a) in the presence of pap 81 d2lefa_ not modelled 13.2 11 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 82 c2cs1A_ not modelled 13.1 13 PDB header:dna binding protein Chain: A: PDB Molecule:pms1 protein homolog 1; PDBTitle: solution structure of the hmg domain of human dna mismatch2 repair protein 83 d1a9we_ not modelled 13.1 8 Fold:Globin-like Superfamily:Globin-like Family:Globins 84 d2e9xa1 not modelled 13.0 15 Fold:GINS helical bundle-like Superfamily:GINS helical bundle-like Family:PSF1 N-terminal domain-like 85 c3crqA_ not modelled 12.8 33 PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel 86 d1hbrb_ not modelled 12.7 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 87 d2a3ra1 not modelled 12.6 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 88 c3ptjA_ not modelled 12.6 9 PDB header:hydrolase Chain: A: PDB Molecule:upf0603 protein at1g54780, chloroplastic; PDBTitle: structural and functional analysis of arabidopsis thaliana thylakoid2 lumen protein attlp18.3 89 d1aqua_ not modelled 12.4 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 90 d1uuja_ not modelled 12.3 33 Fold:Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain Superfamily:Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain Family:Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 91 d1v64a_ not modelled 12.2 18 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 92 d1wova1 not modelled 12.1 13 Fold:Heme oxygenase-like Superfamily:Heme oxygenase-like Family:Eukaryotic type heme oxygenase 93 d1fmja_ not modelled 12.0 5 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 94 d1s7ea1 not modelled 12.0 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 95 d1qpwb_ not modelled 12.0 8 Fold:Globin-like Superfamily:Globin-like Family:Globins 96 c2kqxA_ not modelled 11.8 17 PDB header:chaperone binding protein Chain: A: PDB Molecule:curved dna-binding protein; PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa 97 d1wh7a_ not modelled 11.7 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 98 d1fi6a_ not modelled 11.6 21 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 99 c2q9qC_ not modelled 11.5 15 PDB header:replication Chain: C: PDB Molecule:dna replication complex gins protein psf1; PDBTitle: the crystal structure of full length human gins complex