Job Description P77526 Confidence 99.93% Date Thu Jan 5 12:30:17 GMT 2012 Rank 86 Aligned Residues 186 % Identity 23% Template c1z9hB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:membrane-associated prostaglandin e synthase-2; PDBTitle: microsomal prostaglandin e synthase type-2 Resolution 2.60 Å

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	D	L	Y	F	A	P	.	T	P	N	G	H	K	I	T	L	F	L	E	E	A	E	L	D	Y	R	L	I	K	V	D	L	G	K	G	G	Q	F	R	P	E	F	L	R	I	S	P	N	N	K	I	P	A	I	V	D	H	S	P	A	D	G	G	E	P	L	S	L	F	E	S	G	A	I	L	L	Y	L	A
Query Conservation									.
Alig confidence									.																															.	.	.	.	.															.	.	.
Template Conservation																																								.	.	.	.	.															.	.	.
Template Sequence		L	T	L	Y	Q	Y	K	T	C	P	F	C	S	K	V	R	A	F	L	D	F	H	A	L	P	Y	Q	V	V	E	V	N	P	V	L	R	A	E	.	.	.	.	.	I	K	F	S	S	Y	R	K	V	P	I	L	V	A	.	.	.	Q	E	G	E	S	S	Q	Q	L	N	D	S	S	V	I	I	S	A	L	K
Template Known Secondary structure								T	T														T	T										T	T	T		G	G	.	.	.	.	.	G	T	T		S			S	S						.	.	.			T	T							S
Template Predicted Secondary structure																																								.	.	.	.	.															.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		81	.	.	.	.	.	.																																										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	T	G	L	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	E	T	R	E	R	A	A	T	L	Q	W	L	F	W	Q	V	G	G	L	G	P	M	L	G	Q	N	H	H	F	N
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	L	V	S	G	Q	P	L	E	E	I	I	T	Y	Y	P	A	M	K	A	V	N	D	Q	G	K	E	V	T	E	F	G	N	K	Y	W	L	M	L	N	E	K	E	A	Q	Q	V	Y	S	G	K	E	A	R	T	E	E	M	K	W	R	Q	W	A	D	D	W	L	V	H	L	I	S	P	N	V	Y	R	T
Template Known Secondary structure														G	G	G	S								T	T	S							T	T	T	T														S	S																	T	T	G	G	G	T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.																																						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	A	P	Q	T	I	P	Y	A	I	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	V	E	T	Q	R	L	Y	H	V	L	N	K	R	L	E	N	S	P	W	L	G	G	E	N	Y	S	I	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	E	A	L	A	S	F	D	Y	I	V	R	E	G	K	F	G	A	V	E	G	A	V	A	K	Y	M	G	A	A	A	M	Y	L	I	S	K	R	L	K	S	R	H	R	L	Q	D	N	V	R	E	D	L	Y	E	A	A	D	K	W	V	A	A	V	G	K	D	R	P	F	M	G	G	Q	K	P	N	L	A
Template Known Secondary structure																S																													T	T			S	S																		S	S		S	B	T	T	B	T	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		D	I	A	C	W	P	W	V	N	A	W	T	R	Q	R	.	.	I	D	L	A	M	Y	P	A	V	K	N	W	H	E	R	I	R	S
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		D	L	A	V	Y	G	V	L	R	V	M	E	G	L	D	A	F	D	D	L	M	Q	H	T	H	I	Q	P	W	Y	L	R	V	E	R
Template Known Secondary structure											T	T	T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions