Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence99.89%DateThu Jan 5 12:00:54 GMT 2012
Rank9Aligned Residues134
% Identity15%Templated2hmva1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Potassium channel NAD-binding domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   418.420.........430.........440.........450.........460.........470.........480.........490.......
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE
Query Conservation   



 
 
  
  
   
      
 


 
              
 

      
  
 
  
  

     
  
  
Alig confidence 















































































Template Conservation 
 


 
 
  
  

  
   
  




                  

      
    
  
  

     
     
Template Sequence  KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAST
Template Known Secondary structure 



STT


S
TTTT
S

TT
TTTGGG
S


S
Template Predicted Secondary structure 

























Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   498.500.........510.........520.........530.........540.........550.
Predicted Secondary structure 














Query SS confidence 





















































Query Sequence  IVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPP
Query Conservation       
       


          
   
 
 

 
    
         
 
Alig confidence 





















































Template Conservation               


          
   
 
 

 
    
  

  
    
Template Sequence  LTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDEN
Template Known Secondary structure  TT
S

ST
S

Template Predicted Secondary structure 














Template SS confidence 





















































   87..90.........100.........110.........120.........130.........140
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions