 |
Job Description | P39830 | Confidence | 95.63% | Date | Thu Jan 5 12:00:54 GMT 2012 |
Rank | 328 | Aligned Residues | 73 |
% Identity | 14% | Template | d1vi2a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Aminoacid dehydrogenase-like, C-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
417 | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | |
. | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | N | H | A | L | L | V | G | Y | G | R | V | G | S | L | L | G | E | K | L | L | A | S | D | I | . |
P | L | V | V | I | E | T | S | R | T | R | V | D | E | L | R | . |
. |
. |
. |
. |
. |
. |
. |
E | R | G | V | R | A | V | L | G | N | A | A | N | E | E | I | M | Q | L | A | H | L | E | C | A | K | W | L | I | L |
Query Conservation |   |
  |   |
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   | . |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
G | K | T | X | V | L | L | G | A | G | G | A | S | T | A | I | G | A | Q | G | A | I | E | G | L | K | E | I | K | L | F | N | R | R | D | E | F | F | D | K | A | L | A | F | A | Q | R | V | N | E | N | T | D | C | V | V | T | V | T | D | L | A | D | Q | Q | A | F | A | E | . |
A | L | A | S | A | D | I | L | T | N |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | . |  |  |  | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . |
  |
  |   |
488 | . | 490 |
Predicted Secondary structure |   |
 |
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
T | I | P |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|
|
|
Template Sequence |   |
G | T | K |
Template Known Secondary structure |   |
| S | S |
Template Predicted Secondary structure |   |
|
|
|
Template SS confidence |   |
|
|
|
  |   |
203 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|