 |
Job Description | P39830 | Confidence | 97.13% | Date | Thu Jan 5 12:00:54 GMT 2012 |
Rank | 116 | Aligned Residues | 131 |
% Identity | 13% | Template | d1dlja2 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| 6-phosphogluconate dehydrogenase-like, N-terminal domain
|
Resolution | 1.80 |
|
 |
  |   |
420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 480 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | L | V | G | Y | G | R | V | G | S | L | L | G | E | K | L | L | A | S | D | I | P | L | V | V | I | E | T | S | R | T | R | V | D | E | L | R | E | R | G | V | R | A | V | L | G | N | A | A | N | E | E | I | M | Q | L | A | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | E | C | A | K | W | L | I | L | T | I |
Query Conservation |   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   | . |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |
Template Sequence |   |
I | A | V | A | G | S | G | Y | V | G | L | S | L | G | V | L | L | S | L | . |
Q | N | E | V | T | I | V | D | I | L | P | S | K | V | D | K | I | N | N | G | L | S | P | I | Q | D | E | Y | I | E | Y | Y | L | K | S | K | Q | L | S | I | K | A | T | L | D | S | K | A | A | Y | K | E | A | E | L | V | I | I | A | T |
Template Known Secondary structure |   |
 |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T | . | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
490 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | |
520 | . | . | . | . | . | . | |
|
. | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . |
Predicted Secondary structure |   |
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | E | A | G | E | I | V | A | S | A | R | A | K | N | P | D | I | E | I | I | A | R | A | H | Y | D | D | . |
E | V | A | Y | I | T | E | . |
. |
R | G | A | N | Q | V | V | M | G | E | R | E | I | A | R | T | M | L | E | L | L | E | T | P | P |
Query Conservation |   |
  |   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   | . |   |   |   |   |
|   |   | . | . |   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
P | T | N | Y | N | S | R | I | N | Y | F | D | T | Q | H | V | E | T | V | I | K | E | V | L | S | V | N | S | H | A | T | L | I | I | K | S | T | I | P | I | G | F | I | T | E | M | R | Q | K | F | Q | T | D | R | I | I | F | S | P | E | F | L | R | E | S | K | A | L | Y | D | N | L | Y | P | S |
Template Known Secondary structure |   |
|
|
|  |  | T | T | T | T |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |
| S |
|
|
| T | T |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |
|
|
|
|
|
| T | T | S | T | T |  |  |  |  | S |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|