 |
Job Description | P39830 | Confidence | 96.56% | Date | Thu Jan 5 12:00:54 GMT 2012 |
Rank | 195 | Aligned Residues | 75 |
% Identity | 15% | Template | c3slgB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:pbgp3 protein; |
PDBTitle: crystal structure of pbgp3 protein from burkholderia pseudomallei
|
Resolution | 2.10 Å |
|
 |
  |   |
416 | . | . | . | 420 | . | . | . | . | . | |
. | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | |
. | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | C | N | H | A | L | L | V | G | Y | . |
G | R | V | G | S | L | L | G | E | K | L | L | A | S | D | . |
I | P | L | V | V | I | E | T | S | R | T | R | V | D | E | L | R | E | R | . |
G | V | R | A | V | L | G | N | A | A | N | E | E | I | M | Q | L | A | H | L | E | C | A | K | W | L | I | L | T | I | P |
Query Conservation |   |
  |   |   |
|
|
|
|   |
|   | . |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   | . |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | A | K | K | V | L | I | L | G | V | N | G | F | I | G | H | H | L | S | K | R | I | L | E | T | T | D | W | E | V | F | G | M | D | M | Q | T | D | R | L | G | D | L | V | K | H | E | R | M | H | F | F | E | G | D | I | T | I | N | K | E | W | V | E | Y | H | V | K | K | C | D | V | I | L | P | L | V | A |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | S |
|
| T | T | S | G | G | G | G | G | S | T | T |  |  |  |  |  |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |
| B |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|