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Job DescriptionP39830
Confidence99.39%DateThu Jan 5 12:00:54 GMT 2012
Rank16Aligned Residues145
% Identity12%Templatec3nafA_
PDB info PDB header:ion transportChain: A: PDB Molecule:calcium-activated potassium channel subunit alpha-1; PDBTitle: structure of the intracellular gating ring from the human high-2 conductance ca2+ gated k+ channel (bk channel)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   413......420..... ....430.........440. ..... ...450.........460..... ....470.........480
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Query Sequence  PVDICNHALLVGY. . GRVGSLLGEKLLASDI. . . PLVVI. . . . . ETSRTRVDELRERGVRAVL. . GNAANEEIMQLAHLE
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Template Sequence  AVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIE
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   338.340.........350.........360.........370.........380.........390.........400.........410.......
 
   481........490. ........500.........510.........520........ .530.........540......
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Query Sequence  CAKWLILTIPN. . . . . . . . GYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERG. . . . . . ANQVVMGEREIARTMLEL
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Template Sequence  SADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
Template Known Secondary structure  G
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TTGGGSGGG
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   418.420.........430.........440.........450.........460.........470.........480.........490.......
 
   547..550.......
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Query Sequence  LETPPAGEVVT
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Template Sequence  CLAQGLSTMLA
Template Known Secondary structure  STT
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   498.500........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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