Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence96.31%DateThu Jan 5 12:00:54 GMT 2012
Rank221Aligned Residues105
% Identity15%Templatec3n7uD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   383......390.........400.........410.........420.........430.........440.........450.........460..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVR
Query Conservation 
                                   



 
 
  
  
   
      
 


 
             
Alig confidence 















































































Template Conservation    
   
           
             
 







 
 

  

  
 



 
   
               
Template Sequence  RILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAK
Template Known Secondary structure  TTTT


TTT


STT


SGGG


SS


T
Template Predicted Secondary structure 



































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   463......470.........480.........490.....
Predicted Secondary structure 











Query SS confidence 
































Query Sequence  AVLGNAANEEIMQLAHLECAKWLILTIPNGYEA
Query Conservation   
 

      
  
 
  
  

     
  
Alig confidence 

.......





.
















Template Conservation    ....... 

 

.
  



   



  
Template Sequence  FV. . . . . . . EDLNEM. LPKCDVIVINMPLTEKT
Template Known Secondary structure 
.......SS.GGG
S
S


TTT
Template Predicted Secondary structure 
.......

.





Template SS confidence 
































   237. .240.... .....250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions