Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence94.79%DateThu Jan 5 12:00:54 GMT 2012
Rank465Aligned Residues96
% Identity10%Templatec3mtiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   423......430.........440.........450......... 460.........470.........480.........490.....
Predicted Secondary structure 









.......














Query SS confidence 




































. . . . . . .



































Query Sequence  VGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER. . . . . . . GVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEA
Query Conservation   
 
  
  
   
      
 


 
          .......    
 

      
  
 
  
  

     
  
Alig confidence 











....




















.......










...





















Template Conservation   
 
  
  

 ....    
  

 
   
  
                     ...         
 

  
      
Template Sequence  XGNGNDTAFLAG. . . . LSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHEN. . . LDHYVREPIRAAIFNLGKPHTT
Template Known Secondary structure 
TTST....TSSS
T


S
GGG...GGGT

S


Template Predicted Secondary structure 




....













...














Template SS confidence 















































































   28.30......... 40.........50.........60.........70........ .80.........90.........100
 
   496...500...... ...510.........520.....
Predicted Secondary structure 
.




Query SS confidence 










.


















Query Sequence  GEIVASARAKN. PDIEIIARAHYDDEVAYIT
Query Conservation         
   .    


          
 
Alig confidence 










.


















Template Conservation     
      




 
 
     
      
Template Sequence  LEAIEKILDRLEVGGRLAIXIYDXEKDAVLE
Template Known Secondary structure 

Template Predicted Secondary structure 








Template SS confidence 






























   112.......120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions