Job Description P39830 Confidence 99.59% Date Thu Jan 5 12:00:54 GMT 2012 Rank 15 Aligned Residues 140 % Identity 13% Template c3mt5A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:potassium large conductance calcium-activated channel, PDBTitle: crystal structure of the human bk gating apparatus Resolution 3.00 Å

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		418	.	420	.	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.						.	.	.	440	.	.	.	.	.	.				.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure										.	.												.	.	.	.	.											.	.	.																				.	.
Query SS confidence										.	.												.	.	.	.	.											.	.	.																				.	.
Query Sequence		N	H	A	L	L	V	G	Y	.	.	G	R	V	G	S	L	L	G	E	K	L	.	.	.	.	.	L	A	S	D	I	P	L	V	V	I	.	.	.	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	.	.	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K	W	L
Query Conservation										.	.												.	.	.	.	.											.	.	.																				.	.
Alig confidence										.	.												.	.	.	.	.											.	.	.																				.	.
Template Conservation
Template Sequence		K	H	I	V	V	C	G	H	I	T	L	E	S	V	S	N	F	L	K	D	F	L	H	K	D	R	D	D	V	N	V	E	I	V	F	L	H	N	I	S	P	N	L	E	L	E	A	L	F	K	R	H	F	T	Q	V	E	F	Y	Q	G	S	V	L	N	P	H	D	L	A	R	V	K	I	E	S	A	D	A	C
Template Known Secondary structure									S																		T	T	T	T	T								S	S								T	T						S	S								T	T	S							T	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		486	.	.	.	490									.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.							.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		I	L	T	I	P	.	.	.	.	.	.	.	.	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	.	.	.	.	.	.	A	N	Q	V	V	M	G	E	R	E	I	A	R	T	M	L	E	L	L	E	T	P	P
Query Conservation							.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	L	A	N	K	Y	C	A	D	P	D	A	E	D	A	S	N	I	M	R	V	I	S	I	K	N	Y	H	P	K	I	R	I	I	T	Q	M	L	Q	Y	H	N	K	A	H	L	L	N	I	P	S	W	N	W	K	E	G	D	D	A	I	C	L	A	E	L	K	L	G	F	I	A	Q	S	C	L	A	Q	G
Template Known Secondary structure							T	T		S																					T	T	S							S						G	G	G	G	G	S	T	T			T	T	T	T																				S	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		552	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	V	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	T	M	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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