Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence97.56%DateThu Jan 5 12:00:54 GMT 2012
Rank60Aligned Residues95
% Identity18%Templatec3k96B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   415....420.........430.........440.........450.........460.. .......470.........480.
Predicted Secondary structure 

















.............






Query SS confidence 















































. . . . . . . . . . . . .


















Query Sequence  DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVR. . . . . . . . . . . . . AVLGNAANEEIMQLAHLEC
Query Conservation      



 
 
  
  
   
      
 


 
             ............. 
 

      
  
 
  
Alig confidence 















































.............








.......


Template Conservation   
  

 




  
   
  
   
  
    
       
   
                        .......   
Template Sequence  PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKAS. . . . . . . LEG
Template Known Secondary structure 


S


STTT


S
SSBTTTBTT



TTS
.......TT
Template Predicted Secondary structure 






























.......

Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.. ...
 
   482.......490.........500.........510.......
Predicted Secondary structure 










Query SS confidence 



































Query Sequence  AKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHY
Query Conservation 
  

     
  
       
       


    
Alig confidence 


























.







Template Conservation   
 

  

          
       .  

   
Template Sequence  VTDILIVVPSFAFHEVITRMKPLIDAK. TRIAWGTK
Template Known Secondary structure 




TTT

TT.



Template Predicted Secondary structure 









.

Template SS confidence 



































   76...80.........90.........100.. .......110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions