Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence97.67%DateThu Jan 5 12:00:54 GMT 2012
Rank47Aligned Residues110
% Identity12%Templatec3ggpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   418.420.........430.........440. ........450.........460.........470.........480.........490.....
Predicted Secondary structure 







..


















Query SS confidence 























. .





















































Query Sequence  NHALLVGYGRVGSLLGEKLLASDI. . PLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEA
Query Conservation   



 
 
  
  
   
     .. 
 


 
              
 

      
  
 
  
  

     
  
Alig confidence 























..




























.....



















Template Conservation    
 


 
 

  

  
   
    
   
                       .....       



  
      
Template Sequence  QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA. . . . . KVEDFSPDFVMLSSPVRTFR
Template Known Secondary structure 
S
STT

S
S
TTS
SS
TG.....GGGGG

S
S
GGG
Template Predicted Secondary structure 




















.....






Template SS confidence 















































































   31........40.........50.........60.........70.........80..... ....90.........100.....
 
   496...500.........510. ........520.........530..
Predicted Secondary structure 



..





Query SS confidence 















. .




















Query Sequence  GEIVASARAKNPDIEI. . IARAHYDDEVAYITERGANQV
Query Conservation         
       
..

          
   
 
 
Alig confidence 















..




















Template Conservation   
            

   
                   
Template Sequence  EIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFV
Template Known Secondary structure  S
TT


S

TGGG
Template Predicted Secondary structure 















Template SS confidence 






































   106...110.........120.........130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions