Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence94.65%DateThu Jan 5 12:00:54 GMT 2012
Rank493Aligned Residues147
% Identity14%Templatec3gg9C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein; PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430.........440.........450
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  AGAILSIMLNPVLFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
Query Conservation    
  
 



 
                                   



 
 
  
  
   
      
 


 
 
Alig confidence 















































































Template Conservation    
   
   
           
 
                
  
 
 





 
 

  

  
 


  
       
Template Sequence  LTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN
Template Known Secondary structure  TTTT
TT





TTS
TTTTS



TT


STT

S
Template Predicted Secondary structure 




































Template SS confidence 















































































   123......130.........140.........150.........160.........170.........180.........190.........200..
 
   451........460.........470.........480.........490 .........500.........510...... ...520...
Predicted Secondary structure 














..





.....
Query SS confidence 







































. .

























. . . . .






Query Sequence  TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP. . NGYEAGEIVASARAKNPDIEIIARAH. . . . . YDDEVAY
Query Conservation               
 

      
  
 
  
  

    .. 
  
       
       


   .....       
Alig confidence 

.








....







....











..

























.....






Template Conservation    .         ....    
 

....
  



    


  
  

    
  

 

 


 


 



 

  
Template Sequence  SK. ERARADGFA. . . . VAESKDAL. . . . FEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTA
Template Known Secondary structure  .TT
....
S
....
S



STTTTT
B
TTS
TT

S
GGGB
TT
Template Predicted Secondary structure 

.


....


....






















Template SS confidence 















































































   203. .....210... ......220. ........230.........240.........250.........260.........270...
 
   524..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  ITE
Query Conservation 
  
Alig confidence 


Template Conservation 
  
Template Sequence  LNR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   274..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions