Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence97.54%DateThu Jan 5 12:00:54 GMT 2012
Rank62Aligned Residues92
% Identity13%Templatec3g0oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   419420.........430.........440.........450.........460.........470.........480.........490........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  HALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEI
Query Conservation 



 
 
  
  
   
      
 


 
              
 

      
  
 
  
  

     
  
   
Alig confidence 




















































.......



















Template Conservation 





 
 

  

  
   
  
   
        
             
 .......    
 
   
        
Template Sequence  HVGIVGLGSXGXGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREF. . . . . . . AGVVDALVILVVNAAQVRQV
Template Known Secondary structure 

STT

S
TT
SSSSTTT.......TTT
S

SS
Template Predicted Secondary structure 















.......





Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60 .........70.........80
 
   499500.........510.......
Predicted Secondary structure 





Query SS confidence 


















Query Sequence  VASARAKNPDIEIIARAHY
Query Conservation      
       


    
Alig confidence 


















Template Conservation               

   
Template Sequence  LFDGVAHLXKPGSAVXVSS
Template Known Secondary structure 



GGGS
TT

S
Template Predicted Secondary structure 





Template SS confidence 


















   81........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions