Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence96.53%DateThu Jan 5 12:00:54 GMT 2012
Rank200Aligned Residues79
% Identity16%Templatec3e18A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   419420.........430......... 440.... .....450.........460.........470.........480.........490......
Predicted Secondary structure 




.


.

















Query SS confidence 




















.




.



















































Query Sequence  HALLVGYGRVGSLLGEKLLAS. DIPLV. VIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG
Query Conservation 



 
 
  
  
   
   .   
 .


 
              
 

      
  
 
  
  

     
  
 
Alig confidence 




















.




.


















....









..
















Template Conservation 

 


 
  
  
   
       



 
                ....     


  ..  

 
 
 

   
  
Template Sequence  QLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI. . . . YESYEAVLAD. . EKVDAVLIATPNDSHKE
Template Known Secondary structure 

STSTT
SSTTT

B....
S

..TT


S
GGG
Template Predicted Secondary structure 












....


..





Template SS confidence 















































































   5....10.........20.........30.........40.........50. ........60. ........70........
 
   497..500...
Predicted Secondary structure 
Query SS confidence 






Query Sequence  EIVASAR
Query Conservation        
Alig confidence 






Template Conservation      

 
Template Sequence  LAISALE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   7980.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions