Job Description P39830 Confidence 94.73% Date Thu Jan 5 12:00:54 GMT 2012 Rank 478 Aligned Residues 126 % Identity 17% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.						.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																															.	.																		.	.	.	.	.
Query SS confidence																															.	.																		.	.	.	.	.
Query Sequence		P	V	D	I	C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	.	.	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	.	.	.	.	.	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K	W	L
Query Conservation																															.	.																		.	.	.	.	.
Alig confidence																															.	.																		.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		S	K	S	T	V	N	K	I	T	V	V	G	G	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	I	A	D	R	L	V	L	L	D	L	S	E	G	T	K	G	A	T	M	D	L	E	I	F	N	L	P	N	V	E	I	S	K	D	L	.	.	.	.	.	.	.	.	S	A	S	A	H	S	K	V	V
Template Known Secondary structure															S														T			S								S		G	G	G		T	T							T		T	T					S		G	.	.	.	.	.	.	.	.	G	G	G	T	T		S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.	240	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.					.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	.	.	.	.	M	G	E	R	E	I	A	R	T	M	L	E	L	L	E	T	P	P	A	G	E	V	V	T	G
Query Conservation																																																		.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	T	V	N	S	Q	S	Y	L	D	V	V	Q	S	N	V	D	M	F	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	S	Q	P	V	E	I	M	T	Y	V	T	W	K	L	S	T	F	P	A	N	R	V	I	G	I	G
Template Known Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.		T	T								S	T	T							S	S	S													T			G	G	G					T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.													270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions