Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence95.28%DateThu Jan 5 12:00:54 GMT 2012
Rank390Aligned Residues112
% Identity20%Templatec3aoeC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form)
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   417..420.........430.........440....... ..450.........460.........470.........480.....
Predicted Secondary structure 









...........














Query SS confidence 






























. . . . . . . . . . .





































Query Sequence  CNHALLVGYGRVGSLLGEKLLASDIPLVVIE. . . . . . . . . . . TSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWL
Query Conservation    



 
 
  
  
   
      
 


........... 
              
 

      
  
 
  
  
Alig confidence 






























...........



























....





Template Conservation 
  




 
 

   
  
   








  
 
 

 


   
                   

 ....   


Template Sequence  GARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFG. . . . LEAEVL
Template Known Secondary structure  T


STT
TT
TT


SS
S


B
GGGSTT....SS
S
Template Predicted Secondary structure 



























....



Template SS confidence 















































































   218.220.........230.........240.........250.........260.........270.........280....... ..290...
 
   486...490.........500.........510....... ..520.........530.........
Predicted Secondary structure 








....




Query SS confidence 































. . . .





















Query Sequence  ILTIPNGYEAGEIVASARAKNPDIEIIARAHY. . . . DDEVAYITERGANQVVMGEREI
Query Conservation 
     
  
       
       


    ....      
   
 
 

 
    
Alig confidence 














.....











....











..







Template Conservation 



    
   

 ..... 
 








 
 
 

   
  


.. 
 

  
Template Sequence  VLAAREGALDGDRAR. . . . . QVQAQAVVEVANFGLNPEAEAYLLGKGA. . LVVPDLLS
Template Known Secondary structure 
SSSS
B
T.....T


S
STT
B
TT
..
Template Predicted Secondary structure 







.....













..
Template SS confidence 

























































   294.....300........ .310.........320.........330...... ...340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions