Job Description P39830 Confidence 94.99% Date Thu Jan 5 12:00:54 GMT 2012 Rank 438 Aligned Residues 124 % Identity 15% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																														.															.
Query SS confidence																																																														.															.
Query Sequence		P	Q	A	G	Q	N	L	V	L	A	G	A	I	L	S	I	M	L	N	P	V	L	F	A	L	L	E	K	Y	L	A	K	T	E	T	L	E	E	Q	T	L	E	E	A	I	E	E	E	K	Q	I	P	V	D	I	C	N	H	A	L	.	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	.	L	L	A	S
Query Conservation																																																														.															.
Alig confidence																				.	.																																									.															.
Template Conservation																				.	.
Template Sequence		S	R	G	A	G	D	T	A	T	S	D	L	A	L	Y	L	I	L	.	.	S	V	F	R	L	A	S	Y	S	E	R	A	A	R	T	G	D	P	E	T	F	N	R	V	H	L	E	I	G	K	S	A	H	N	P	R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L
Template Known Secondary structure			T	T	T	T														.	.					T									T	T														T	T	T				S	T	T	S								S													T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A
Query Conservation
Alig confidence																											.	.	.	.	.	.	.						.
Template Conservation																											.	.	.	.	.	.	.						.
Template Sequence		G	M	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	G	A	E	R	V	.	.	.	.	.	.	.	D	S	L	E	E	.	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T
Template Known Secondary structure										S	S											T					.	.	.	.	.	.	.	S	S				.						S									S	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.						.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions