Job Description P39830 Confidence 97.13% Date Thu Jan 5 12:00:54 GMT 2012 Rank 117 Aligned Residues 76 % Identity 17% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G
Query Conservation
Alig confidence																																																	.	.	.	.								.	.	.	.
Template Conservation																																																	.	.	.	.								.	.	.	.
Template Sequence		D	K	K	I	G	F	L	G	L	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	.	.	.	.	G	R	T	P	A	E	V	.	.	.	.	V	S	T	C	D	I	T	F	A	C	V	S	D	P	K	A	A	K
Template Known Secondary structure		S	S								S													T	T								S	S	G	G	G	G						T	T				.	.	.	.		S						.	.	.	.					S							S	S
Template Predicted Secondary structure																																																	.	.	.	.								.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		497	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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