Job Description P39830 Confidence 97.49% Date Thu Jan 5 12:00:54 GMT 2012 Rank 67 Aligned Residues 136 % Identity 15% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.														.
Predicted Secondary structure																													.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	I	C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	.	.	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	H
Query Conservation																													.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.
Template Sequence		F	G	K	V	S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	.	.	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A
Template Known Secondary structure						S								S	T	T													T	T	S							S									T	S	S	S		S	S	.	.			T	T	T						T	T	B	T	T	T					S
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490															.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.							.	.	.	520	.	.	.	.	.	.	.	.				.	530	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.													.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.													.	.	.
Query Sequence		L	E	C	A	K	W	L	I	L	T	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	.	.	.	.	.	.	Y	D	D	E	V	A	Y	I	T	E	R	G	.	.	.	A	N	Q	V	V	M	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.													.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		I	A	E	A	D	L	I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F	Q	V	L	S	N	P
Template Known Secondary structure						S										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	E	I	A	R	T	M	L	E	L	L	E	T	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	L	A	E	G	T	A	M	K	D	L	A	N	P	D
Template Known Secondary structure						T	T								S		S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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