Job Description P39830 Confidence 95.43% Date Thu Jan 5 12:00:54 GMT 2012 Rank 371 Aligned Residues 134 % Identity 16% Template c2nloA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum Resolution 1.64 Å

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		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.							460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																			.																			.	.	.	.	.	.
Query SS confidence																																			.																			.	.	.	.	.	.
Query Sequence		E	K	Q	I	P	V	D	I	C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	.	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	.	.	.	.	.	.	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C
Query Conservation																																			.																			.	.	.	.	.	.
Alig confidence																																			.																			.	.	.	.	.	.															.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		E	E	G	L	P	N	A	K	L	D	S	V	V	Q	V	G	A	G	G	V	G	N	A	V	A	Y	A	L	V	T	H	G	V	Q	K	L	Q	V	A	D	L	D	T	S	R	A	Q	A	L	A	D	V	I	N	N	A	V	G	R	E	A	V	V	G	V	D	A	R	G	I	E	D	.	.	.	.	V	I	A	A
Template Known Secondary structure						T	T				S								S	T	T											T	T		S							S	S																T	S								S	T	T				.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.					.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	.	.	.	.	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	M	G	E	R	E	I	A	R	T	M	L	E	L
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.
Template Conservation
Template Sequence		A	D	G	V	V	N	A	T	P	M	G	M	P	A	H	P	G	T	A	F	D	V	S	C	L	T	K	D	H	W	V	G	D	V	V	Y	M	P	I	E	T	E	L	L	K	A	A	R	A	L	G	C	E	T	L	D	G	T	R	M	A	I	H	Q	A	V	D	A	F
Template Known Secondary structure		S	S						S	S	T	T	S	T	T	S		S		S	S		G	G	G			T	T						S			S	S	S	S											T						T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions