Job Description P39830 Confidence 95.48% Date Thu Jan 5 12:00:54 GMT 2012 Rank 358 Aligned Residues 105 % Identity 18% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.			460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																								.	.																			.	.																																		.	.	.
Query SS confidence																								.	.																			.	.																																		.	.	.
Query Sequence		A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	.	.	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	.	.	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	.	.	.
Query Conservation																								.	.																			.	.																																		.	.	.
Alig confidence																								.	.																			.	.																																		.	.	.
Template Conservation
Template Sequence		I	T	V	V	G	V	G	D	V	G	M	A	C	A	I	S	I	L	L	K	G	L	A	D	E	L	A	L	V	D	A	D	T	D	K	L	R	G	E	A	L	D	L	Q	H	G	S	L	F	L	S	T	P	K	I	V	F	G	K	D	Y	N	V	S	A	N	S	K	L	V	I	I	T	A	G	A	R	M	V	S
Template Known Secondary structure								S												T	T	T	S		S							S															T	T	T	T		S								S	S	G	G	G	G	T	T									S					T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
										493	.	.	.	.	.	.	500	.	.					.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	E	A	G	E	I	V	A	S	A	.	.	.	.	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I
Query Conservation		.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		G	Q	T	R	L	D	L	L	Q	R	N	V	A	I	M	K	A	I	V	P	G	V	I	Q	N	S	P	D	C	K	I	I	V	V	T	N	P	V	D	I	L	T	Y	V
Template Known Secondary structure		T	T		S	S		T	T											T	T	T					S	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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