Job Description P39830 Confidence 95.56% Date Thu Jan 5 12:00:54 GMT 2012 Rank 342 Aligned Residues 98 % Identity 17% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

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		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.			440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.												.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	I	C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	.	.	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	.	.	.	.	.	.	.	.	.	.	.	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E
Query Conservation																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.									.	.																				.	.	.	.	.	.	.	.	.	.	.											.	.									.
Template Conservation																		.	.																																																			.	.									.
Template Sequence		S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	.	.	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	.	.	S	K	F	L	E	N	V	T	.	N
Template Known Secondary structure		S	S	S										T	T			.	.							T		T	T									S																	G	G	G	G	S	T	T						S			.	.						T			.	S
Template Predicted Secondary structure																		.	.																																																			.	.									.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.		150
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		T	Y	D	V	I	I	V	D	S	S	D	N	Q	N	.	.	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C	E	S	L
Template Known Secondary structure																.	.																						T
Template Predicted Secondary structure																.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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