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Job Description | P39830 | Confidence | 96.19% | Date | Thu Jan 5 12:00:54 GMT 2012 |
Rank | 237 | Aligned Residues | 102 |
% Identity | 18% | Template | c2f00A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; |
PDBTitle: escherichia coli murc
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Resolution | 2.50 Å |
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399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | |
. | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | |
. | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | Q | T | L | E | E | A | I | E | E | E | K | Q | I | P | V | D | I | C | N | H | A | L | L | V | G | Y | G | R | V | G | S | . |
L | L | G | E | K | L | L | A | S | D | I | P | L | V | V | I | E | T | . |
S | R | T | R | V | D | E | L | R | E | R | G | V | R | A | V | L | G | N | A | A | N | E | E | I | M | Q | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
X | N | T | Q | Q | L | A | K | L | R | S | I | V | P | E | X | R | R | V | R | H | I | H | F | V | G | I | G | G | A | G | X | G | G | I | A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | X | N | L | G | A | T | I | Y | F | N | H | R | P | E | N | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
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477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | H | L | E | C | A | K | W | L | I | L | T | I | P | N | G | Y | E | A | G | E | I | V | A | S | A | R | A | K | N | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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V | R | D | A | S | V | V | V | V | S | S | A | I | S | A | D | N | P | E | I | V | A | A | H | E | A | R | I | P |
Template Known Secondary structure |   |
. | . | G | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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