Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence95.85%DateThu Jan 5 12:00:54 GMT 2012
Rank300Aligned Residues100
% Identity21%Templatec1zh8B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   420.........430. ........440 .... .....450......... 460.........470.........480.........490....
Predicted Secondary structure 


.

..

.


.














Query SS confidence 











.








. .



.














.


































Query Sequence  ALLVGYGRVGSL. LGEKLLASD. . IPLV. VIETSRTRVDELRER. GVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYE
Query Conservation 


 
 
  
  .
   
    ..  
 .


 
          .    
 

      
  
 
  
  

     
  
Alig confidence 











.








..



.














.








..





...














Template Conservation 
 


 
      
   
        



 
                    
 .. 


  ...   
 
 
 

   
Template Sequence  LGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKXVGNPAVFDSY. . EELLES. . . GLVDAVDLTLPVELN
Template Known Secondary structure 

STTTTTT
SSSS
S
..TT...T

S


GGG
Template Predicted Secondary structure 















..
...






Template SS confidence 















































































   910.........20.........30.........40.........50.........60.. ...... .70.........80...
 
   495....500.........510.... .....520.......
Predicted Secondary structure 



...


Query SS confidence 



















. . .












Query Sequence  AGEIVASARAKNPDIEIIAR. . . AHYDDEVAYITER
Query Conservation 
       
       


 ...         
   
Alig confidence 









...






...












Template Conservation        
   ...
  
  


 
    
   
   
Template Sequence  LPFIEKALRK. . . GVHVICEKPISTDVETGKKVVEL
Template Known Secondary structure  TT...T
SSSSSS
Template Predicted Secondary structure 
...









Template SS confidence 



































   84.....90... ......100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions