Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence97.61%DateThu Jan 5 12:00:54 GMT 2012
Rank56Aligned Residues119
% Identity14%Templatec1pgqA_
PDB info PDB header:oxidoreductase (choh(d)-nadp+(a))Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism
Resolution3.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   417..420.........430.........440.........450.........460.........470.........480.........490......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG
Query Conservation    



 
 
  
  
   
      
 


 
              
 

      
  
 
  
  

     
  
 
Alig confidence 















































































Template Conservation 

 






 

  

 

   
  
 



       
   

       
 
  


  
  





 

    

Template Sequence  QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD
Template Known Secondary structure 
BS

STT


SSTTTTTTSS

SSB
SS


S
S
Template Predicted Secondary structure 































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   497..500.........510....... ..520.........530.....
Predicted Secondary structure 





......




Query SS confidence 




















. . . . . .

















Query Sequence  EIVASARAKNPDIEIIARAHY. . . . . . DDEVAYITERGANQVVMG
Query Conservation        
       


    ......      
   
 
 

 
Alig confidence 




















......

















Template Conservation   

  
   
  
 



 


    
   
  
   

 




Template Sequence  NFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG
Template Known Secondary structure  TTT

TT

S


TT
Template Predicted Secondary structure 















Template SS confidence 












































   82.......90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions