Return to main results Retrieve Phyre Job Id

Job DescriptionP39830
Confidence97.82%DateThu Jan 5 12:00:54 GMT 2012
Rank37Aligned Residues112
% Identity14%Templatec1pgjA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei
Resolution2.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   422.......430.........440.........450.........460... ......470.........480.........490......
Predicted Secondary structure 












.....











Query SS confidence 









































. . . . .
































Query Sequence  LVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRA. . . . . VLGNAANEEIMQLAHLECAKWLILTIPNGYEAG
Query Conservation 
 
 
  
  
   
      
 


 
              .....
 

      
  
 
  
  

     
  
 
Alig confidence 









































.....












..

















Template Conservation 




 

  

 

   
  
 



     
 
   

    
       
  


  ..
  
 



 
 

  
 
Template Sequence  VVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAAS. . LKKPRKALILVQAGAATD
Template Known Secondary structure 

STT


SSTTTSTTGGG
S
..B
SS




S
Template Predicted Secondary structure 























..







Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60..... ....70.........80...
 
   497..500.........510....... ..520.........530.....
Predicted Secondary structure 





......




Query SS confidence 




















. . . . . .

















Query Sequence  EIVASARAKNPDIEIIARAHY. . . . . . DDEVAYITERGANQVVMG
Query Conservation        
       


    ......      
   
 
 

 
Alig confidence 




















......

















Template Conservation   

  
   
  
 



 


    
   
  
   

 




Template Sequence  STIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG
Template Known Secondary structure 

TT





TTT
Template Predicted Secondary structure 














Template SS confidence 












































   84.....90.........100.........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions