Job Description P39830 Confidence 95.68% Date Thu Jan 5 12:00:54 GMT 2012 Rank 318 Aligned Residues 124 % Identity 17% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.						460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		E	K	Q	I	P	V	D	I	C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	.	.	.	.	.	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K
Query Conservation																																																					.	.	.	.	.
Alig confidence																																																					.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		Q	R	L	N	W	L	R	P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	Q	N	I	V	L	A	N	R	T	F	S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	N	I	Q	A	V	S	M	D	S	I	P	.	.	.	.	.	.	.	.	L	Q	T	Y	D
Template Known Secondary structure				T	T				T	T								S	S	T	T	T	T	T	T							T	T								S	S												G	G	G	S							G	G	G			.	.	.	.	.	.	.	.		S		B	S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.					.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																			.
Query SS confidence																																		.	.	.	.																			.
Query Sequence		W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	.	.	.	.	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	.	M	G	E	R	E	I	A	R	T	M	L	E	L
Query Conservation																																		.	.	.	.																			.
Alig confidence												.	.	.	.	.	.																	.	.	.	.																			.
Template Conservation												.	.	.	.	.	.
Template Sequence		L	V	I	N	A	T	S	A	A	S	.	.	.	.	.	.	V	D	A	E	I	L	K	L	G	S	A	F	Y	D	M	Q	Y	A	K	G	T	D	T	P	F	I	A	L	C	K	S	L	G	L	T	N	V	S	D	G	F	G	M	L	V	A	Q	A	A	H	S	F
Template Known Secondary structure												.	.	.	.	.	.							T	T	B	S					S				S	S	S											T	T							S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions