Job Description P39830 Confidence 97.35% Date Thu Jan 5 12:00:54 GMT 2012 Rank 89 Aligned Residues 144 % Identity 15% Template c1m6vE_ PDB info PDB header:ligase Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain; PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.												.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	E	K	Q	I	P	V	D	I	C	N	H	A	L	L	V	G	Y	G	R	V	.	.	.	.	.	.	.	.	.	.	.	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	C	E	A	N	P	S	T	D	R	E	K	I	M	V	L	G	G	G	P	N	R	I	G	Q	G	I	E	F	D	Y	C	C	V	H	A	S	L	A	L	R	E	D	G	Y	E	T	I	M	V	N	C	N	P	E	T	V	S	T	D	Y	D	T	S	D	R	L	Y	F	E	P	V	T	L	E	D	V	L	E
Template Known Secondary structure		S								S	S	S										S		B	T	T	B																		T	T										T	T	S	G	G	G	S	G	G	G	S	S								S
Template Predicted Secondary structure
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.					.	.	.	.	.	510	.	.	.	.	.	.	.	.	.		520	.	.	.	.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.																.														.	.	.
Query SS confidence																															.	.	.	.																.														.	.	.
Query Sequence		L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	.	.	.	.	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	.	E	V	A	Y	I	T	E	R	G	A	N	Q	V	.	.	.	V	M	G	E	R	E	I	A	R	T	M	L	E	L	L
Query Conservation																															.	.	.	.																.														.	.	.
Alig confidence																															.	.	.	.																.														.	.	.
Template Conservation
Template Sequence		I	V	R	I	E	K	P	K	G	V	I	V	Q	Y	G	G	Q	T	P	L	K	L	A	R	A	L	E	A	A	G	V	P	V	I	G	T	S	P	D	A	I	D	R	A	E	D	R	E	R	F	Q	H	A	V	E	R	L	K	L	K	Q	P	A	N	A	T	V	T	A	I	E	M	A	V	E	K	A	K	E	I
Template Known Secondary structure									S					S	S	S						T	T							T	T			B		S	S																					T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
		548	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	P
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		709	710	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions