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Job DescriptionP39830
Confidence99.82%DateThu Jan 5 12:00:54 GMT 2012
Rank13Aligned Residues146
% Identity16%Templatec1lnqC_
PDB info PDB header:metal transportChain: C: PDB Molecule:potassium channel related protein; PDBTitle: crystal structure of mthk at 3.3 a
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   409410.........420.........430.........440.........450.........460.........470.........480........
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Query Sequence  EKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILT
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Template Sequence  AVERLLEFLRHVVICGWSESTLECLREL. . RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVD
Template Known Secondary structure  TTTTTTTT

S

TTG..GGS
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GGGTT
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TTST
STT
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   90.........100.........110....... ..120.........130.........140.........150.........160.......
 
   489490.........500.........510.........520.........530.........540.........550......
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Query Sequence  IPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVV
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Template Sequence  LESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMFV
Template Known Secondary structure 
SSTT
TTS
SSGGGTT
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   185....190.........200.........210.........220.........230.........240.........250..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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