Job Description P39830 Confidence 95.60% Date Thu Jan 5 12:00:54 GMT 2012 Rank 335 Aligned Residues 113 % Identity 13% Template c1gv1D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for thermophilic protein stability:2 structures of thermophilic and mesophilic malate3 dehydrogenases Resolution 2.5 Å

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		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.												.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																							.	.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	.	.	I	P	L	V	V	I	E	T	S	R	T	R	V	D	.	.	.	.	.	.	.	.	.	.	.	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	M	Q	L	A	H	L	E	C	A	K	W	L	I
Query Conservation																							.	.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.
Template Sequence		I	T	V	I	G	A	G	N	V	G	A	T	T	A	F	R	I	A	D	K	K	L	A	R	E	L	V	L	L	D	V	V	E	G	I	P	Q	G	K	G	L	D	M	Y	E	T	G	P	V	G	L	F	D	T	K	I	T	G	S	N	D	.	.	.	.	.	.	.	.	Y	A	D	T	A	D	S	D	I	V	I
Template Known Secondary structure								S													T	T			S							S	S	S	S											T	T					T									S		.	.	.	.	.	.	.	.	G	G	G	S	T	T		S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.	.	.
		487	.	.	490						.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		L	T	I	P	.	.	.	.	.	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	M	G	E	R	E	I	A	R	T	M	L	E	L	L	E	T	P	P	A	G	E	V	V	T	G
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.																			.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	A	G	L	L	L	M	K	N	A	G	I	V	K	E	V	T	D	N	I	M	K	H	S	K	N	.	P	I	I	I	V	V	S	N	P	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	M	T	H	V	A	W	V	R	S	G	L	P	K	E	R	V	I	G	M	A
Template Known Secondary structure																								T	T		S	S	.								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T			G	G	G
Template Predicted Secondary structure																													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.																		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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