 |
Job Description | P39830 | Confidence | 97.06% | Date | Thu Jan 5 12:00:54 GMT 2012 |
Rank | 127 | Aligned Residues | 71 |
% Identity | 21% | Template | c1gpjA_ |
PDB info |
PDB header:reductase | Chain: A: PDB Molecule:glutamyl-trna reductase; |
PDBTitle: glutamyl-trna reductase from methanopyrus kandleri
|
Resolution | 1.95 Å |
|
 |
  |   |
417 | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | |
. | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | N | H | A | L | L | V | G | Y | G | R | V | G | S | L | L | G | E | K | L | L | A | S | D | I | P | . |
L | V | V | I | E | T | S | R | T | R | V | D | E | L | R | E | R | . |
G | V | R | A | V | L | G | N | A | A | N | E | E | I | M | Q | L | A | H | L | E | C | A | K | W | L | I | L | T | I | P | N | G | Y |
Query Conservation |   |
  |   |
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   | . |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   | . |   |
|   |   |
|
|
|
|
|
|
|
|   |
|   |   |
Template Sequence |   |
D | K | T | V | L | V | V | G | A | G | E | M | G | K | T | V | A | K | S | L | V | D | R | G | V | R | A | V | L | V | A | N | R | T | Y | E | R | A | V | E | L | A | R | D | L | G | . |
. |
. |
. |
. |
G | E | A | V | R | F | D | E | L | V | D | . |
H | L | A | R | S | D | V | V | V | S | A | T | A | A | P | H |
Template Known Secondary structure |   |
T |
|  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . |
|  |  |
|
| G | G | G |  |  |  | . |  |  |  | T |
| S |  |  |  |  |
|
| S | S | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|