Phyre 2 alignment of P76641 with d2r8ca2

Job Description P76641
Confidence 99.78% Date Thu Jan 5 12:25:13 GMT 2012

Rank 69 Aligned Residues 258

% Identity 19% Template d2r8ca2

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Zn-dependent arginine carboxypeptidase-like

Resolution 2.31

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	F	V	D	T	H	I	H	Y	P	Q	S	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	V	H	P	Q	S	V	D	A	L	F	E	A	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence	G	L	I	D	L	H	V	H	V	V	A	I	E	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	R	V	A	T	L	P	N	V	L	V	T	L	R	A	V	P	I	M	R	A	M	L	R	R	G	F	T	T	V	R	D	A	G	G	.	A	G	Y	P	F	K	Q	A	V	E	S	G
Template Known Secondary structure									T	T			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S																			T	T								S	S	.											T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
	58	.	60	.	.	.	.	.	.	.	.	.	70	.	.																	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120

	157	.	.	160	.	.	.	.	.	.	.	.	.	170	.																											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence	S	H	I	N	M	R	M	I	A	G	K	V	M	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	A	P	D	Y	L	L	D	T	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	.	.	.	.	.	.	H	K	N	G	R	L	L	Y
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence	L	V	E	G	P	R	L	F	V	S	G	R	A	L	S	Q	T	G	G	H	A	D	P	R	A	R	S	D	Y	M	P	P	D	S	P	C	G	C	C	V	R	V	G	A	L	G	R	V	A	D	G	V	D	E	V	R	R	A	V	R	E	E	L	Q	M	G	A	D	Q	I	K	I	M	A	S	G	G	V	A	S
Template Known Secondary structure	S	S										S					T	T	S	T	T						S	S	S				S		S	S	S	S	S			T	T								S															T		S	S						B			S	S	S
Template Predicted Secondary structure
Template SS confidence
	121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

	205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	I	T	P	R	F	A	P	T	S	S	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P	D	T	W	V	H	T	H	L	C	E	N	K	D	E	I	A	W	V	K	S	L	Y	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H	C	V	H	L	E	E	K	E
Query Conservation
Alig confidence																										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	P	T	D	P	V	G	V	F	G	Y	S	E	D	E	I	R	A	I	V	A	E	A	Q	G	R	.	G	T	Y	V	L	A	H	A	Y	T	P	A	A	I	A	R	A	V	R	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	R	T	I	E	H	G	N	L	I	D	D	E	T
Template Known Secondary structure	S	S			S	S		B		S															T	.	T									S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S						T	T
Template Predicted Secondary structure																										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.																				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

	285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.																						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	W	D	R	L	S	E	T	K	S	S	I	A	F	C	P	T	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	G	S	G	L	F	N	L	K	K	A	W	Q	K	K	V	K	V	G	M	G	T	D	I	G	A	G	T	T	F	N	M	L	Q	T	L	N	E	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	A	R	L	V	A	E	H	G	A	Y	V	V	P	T	L	V	T	Y	D	A	L	A	S	E	G	E	K	Y	G	L	P	P	E	S	I	A	K	I	A	D	V	H	G	A	G	L	H	S	I	E	I	M	K	R	A	G	V	K	M	G	F	G	T	D	L	L	G	E	A	Q	R	L	Q	S	D	E	F	R	I	L
Template Known Secondary structure							T	T							T										T	T	T	T	T							T	T	S	T	T	T	G	G	G											T	T											G	G	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
	261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

	344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	K	V	L	Q	L	Q	G	Y	R	L	S	A	Y	E	A	F	Y	L	A	T	L	G	G	A	K	S	L	G	L	D	D	L	I	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence	A	.	.	.	.	.	.	.	E	V	L	S	P	A	E	V	I	A	S	A	T	I	V	S	A	E	V	L	G	M	Q	D	K	L	G
Template Known Secondary structure	T	.	.	.	.	.	.	.	T	T	S									T	T							T	T		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
	341								.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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