Phyre 2 alignment of P76641 with d2gwga1

Job Description P76641
Confidence 84.90% Date Thu Jan 5 12:25:13 GMT 2012

Rank 161 Aligned Residues 280

% Identity 11% Template d2gwga1

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like

Resolution 1.80

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.
Query Sequence	G	F	V	D	T	H	I	H	Y	P	Q	S	E	M	V	G	A	Y	G	E	Q	L	L	E	W	L	.	.	.	.	.	.	.	.	.	.	N	K	H	T	F	P	T	E	R	R	Y	E	D	L	E	Y	A	R	E	M	S	A	F	F	I	K	Q	L	L	R	N	G	T	T	T	A	L	V	F	G	T	V	H	P
Query Conservation																											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence	X	I	I	D	I	H	G	H	Y	T	.	.	.	.	.	.	T	A	P	K	A	L	E	D	W	R	N	R	Q	I	A	G	I	K	D	P	S	V	X	P	K	V	S	E	L	K	I	S	D	D	E	L	Q	A	S	I	I	E	N	Q	L	K	K	X	Q	E	R	G	S	D	L	T	V	F	S	P	R	A	G	D
Template Known Secondary structure											.	.	.	.	.	.																				G	G	G				G	G	G														T	T									T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10							.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

	147	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																																																	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																																																																	.	.	.
Query Sequence	Q	S	V	.	.	.	.	.	.	.	.	.	D	A	L	F	E	A	A	S	H	I	N	M	R	M	I	A	G	K	V	M	M	D	R	N	A	P	D	Y	L	L	D	T	A	E	S	S	Y	H	Q	S	K	E	L	I	E	R	W	H	K	N	G	R	L	L	Y	A	I	T	P	R	F	A	P	T	.	.	.	S
Query Conservation				.	.	.	.	.	.	.	.	.																																																																	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																												.	.	.	.	.																																	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence	F	N	V	S	S	T	W	A	A	I	C	N	E	L	C	Y	R	V	S	Q	L	F	P	D	N	F	I	G	A	A	X	L	P	Q	S	P	G	V	D	.	.	.	.	.	P	K	T	C	I	P	E	L	E	K	C	V	K	E	Y	G	F	V	A	I	N	L	N	P	D	P	S	G	G	H	W	T	S	P	P	L
Template Known Secondary structure																						S	T	T	T											T	T	S		.	.	.	.	.	G	G	G	G										T	S									S		T	T	S	S				S			T
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

	215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	P	E	Q	M	A	M	A	Q	R	L	K	E	E	Y	P	D	T	W	V	H	T	H	L	C	E	N	K	D	E	I	A	W	V	K	S	L	Y	P	D	H	D	G	Y	L	D	V	Y	H	Q	Y	G	L	T	G	K	N	C	V	F	A	H	C	V	H	L	E	E	K	E	W	D	R	L	S	E	T	K	S	S
Query Conservation
Alig confidence																																																			.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence	T	D	R	I	W	Y	P	I	Y	E	K	X	V	E	L	E	I	P	A	X	I	H	V	S	T	G	A	H	Y	L	N	A	D	T	T	A	F	X	Q	C	V	A	G	D	L	F	K	D	F	P	.	.	.	.	E	L	K	F	V	I	P	H	G	G	G	A	V	P	Y	H	W	G	R	F	R	G	L	A	Q	E
Template Known Secondary structure	T	S	G	G	G											T										T	T																S							T	.	.	.	.	T						S	G	G	G	T	T	T	G	G	G
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
	157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

	295	.	.	.	.	300	.	.	.	.	.	.	.	.									.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.											.	.																																			.	.
Query SS confidence															.	.	.	.	.	.	.	.											.	.																																			.	.
Query Sequence	I	A	F	C	P	T	S	N	L	Y	L	G	S	G	.	.	.	.	.	.	.	.	L	F	N	L	K	K	A	W	Q	K	.	.	K	V	K	V	G	M	G	T	D	I	G	A	G	T	T	F	N	M	L	Q	T	L	N	E	A	Y	K	V	L	Q	L	Q	G	Y	.	.	R	L	S	A	Y	E	A	F	Y	L
Query Conservation															.	.	.	.	.	.	.	.											.	.																																			.	.
Alig confidence															.	.	.	.	.	.	.	.											.	.																																			.	.
Template Conservation
Template Sequence	X	K	K	P	L	L	E	D	H	V	L	N	N	I	F	F	D	T	C	V	Y	H	Q	P	G	I	D	L	L	N	T	V	I	P	V	D	N	V	L	F	A	S	E	X	I	G	A	V	R	G	I	D	P	R	T	G	F	Y	Y	D	D	T	K	R	Y	I	E	A	S	T	I	L	T	P	E	E	K	Q	Q	I
Template Known Secondary structure	T	T								T	T	T	T									S											S		G	G	G								S	S	S						T	T	T	T			T	T		T								S	S	S
Template Predicted Secondary structure
Template SS confidence
	242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

	363	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	T	L	G	G	A	K	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Y	E	G	N	A	R	R	V	Y
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
	322	.	.	.	.	.	.	.	330

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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