Return to main results Retrieve Phyre Job Id

Job DescriptionP76641
Confidence99.59%DateThu Jan 5 12:25:13 GMT 2012
Rank79Aligned Residues252
% Identity15%Templated1xrta2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain
Resolution1.61

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130.........140... ......150.
Predicted Secondary structure 




































.....

Query SS confidence 


































































. . . . .







Query Sequence  GFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGT. . . . . VHPQSVDA
Query Conservation 
 

 
 
                                                 
 
       .....        
Alig confidence 



















...........................



















.....







Template Conservation 



 
 
         

 ...........................      
   




                  
Template Sequence  GFIDIHVHLRDPGQTYKEDI. . . . . . . . . . . . . . . . . . . . . . . . . . . ESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNY
Template Known Secondary structure 



TTT
TTT

...........................TT
S
SSS
S
S
Template Predicted Secondary structure 










...........................













Template SS confidence 















































































   56...60.........70..... ....80.........90.........100........
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  LFEAASHINMRMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPD
Query Conservation          
                                                                       
Alig confidence 






































.............

























.
Template Conservation                                       
 .............             
        
   . 
Template Sequence  ILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGC. . . . . . . . . . . . . VAFTDDGSPVMDSSVMRKALELASQL. G
Template Known Secondary structure 
SS
B
SBGGG
SSSB

T
.............

B

TTS



.T
Template Predicted Secondary structure 













.............









.
Template SS confidence 















































































   109110.........120.........130.........140....... ..150.........160.........170... .
 
   232.......240.........250.........260.........270.........280.........290.........300.........310.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  TWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLYLGSGLFN
Query Conservation                                              
                      
            
Alig confidence 












.......



























































Template Conservation    
  
       .......                        
                
  
               
Template Sequence  VPIMDHCEDDKLA. . . . . . . YAEEIQIARDGILAQRTGGHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLEDRLA
Template Known Secondary structure 



GGGGT.......



S


STT


GGGG


Template Predicted Secondary structure 






.......















Template SS confidence 















































































   175....180....... ..190.........200.........210.........220.........230.........240.......
 
   312.......320.........330.........340.........350.........360.........370........
Predicted Secondary structure 






















Query SS confidence 


































































Query Sequence  LKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIG
Query Conservation         
     


                         


  


   
 


  


    
Alig confidence 































































..
Template Conservation      
  
      

                         

    
    
 
 

 



 ..
Template Sequence  LIEGVKRGIIDCFATDHAPHQTGIIGLQTALPSALELYRKGIISLKKLIEMFTINPARIIGVDL. . G
Template Known Secondary structure  T
S



B








GGGTTSS
TT
S
..
Template Predicted Secondary structure 
























..
Template SS confidence 


































































   290.........300.........310.........320.........330.........340.........350... .
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions